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  5. Glyma.11G056500

Glyma.11G056500


Description : Calcium-binding EF-hand family protein


Gene families : OG_42_0000644 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000644_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.11G056500
Cluster HCCA clusters: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
Brara.H02086.1 No alias calcium sensor *(CML) 0.04 Orthogroups_2024-Update
Brara.I00982.1 No alias calcium sensor *(CML) 0.04 Orthogroups_2024-Update
Glyma.17G175400 No alias Calcium-binding EF-hand family protein 0.03 Orthogroups_2024-Update
MA_194997g0010 No alias (at1g24620 : 137.0) EF hand calcium-binding protein... 0.03 Orthogroups_2024-Update
Sobic.003G425500.1 No alias calcium sensor *(CML) 0.04 Orthogroups_2024-Update
Sopen01g050420 No alias EF hand 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004784 superoxide dismutase activity IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 118 180
IPR002048 EF_hand_dom 47 109
No external refs found!