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  5. Glyma.11G062900

Glyma.11G062900


Description : Clathrin, heavy chain


Gene families : OG_42_0001928 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001928_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.11G062900
Cluster HCCA clusters: Cluster_526

Target Alias Description ECC score Gene Family Method Actions
Mp6g19660.1 No alias heavy chain of clathrin triskelion 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA InterProScan predictions
BP GO:0006886 intracellular protein transport IEA InterProScan predictions
BP GO:0016192 vesicle-mediated transport IEA InterProScan predictions
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEA InterProScan predictions
CC GO:0030132 clathrin coat of coated pit IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004371 glycerone kinase activity IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006071 glycerol metabolic process IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0019400 alditol metabolic process IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000547 Clathrin_H-chain/VPS_repeat 700 839
IPR000547 Clathrin_H-chain/VPS_repeat 1438 1578
IPR000547 Clathrin_H-chain/VPS_repeat 1288 1431
IPR000547 Clathrin_H-chain/VPS_repeat 1144 1280
IPR000547 Clathrin_H-chain/VPS_repeat 992 1131
IPR000547 Clathrin_H-chain/VPS_repeat 849 975
IPR000547 Clathrin_H-chain/VPS_repeat 556 689
IPR022365 Clathrin_H-chain_propeller_rpt 153 196
IPR022365 Clathrin_H-chain_propeller_rpt 19 54
IPR015348 Clathrin_H-chain_linker_core 343 366
No external refs found!