Glyma.11G076000

Description : Ribosomal protein L2 family

Gene families : OG_42_0001760 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001760_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.11G076000
Cluster	HCCA clusters: Cluster_212

Target	Alias	Description	ECC score	Gene Family Method
170971	No alias	Ribosomal protein L2 family	0.02	Orthogroups_2024-Update
A4A49_56239	No alias	60s ribosomal protein l8	0.04	Orthogroups_2024-Update
Bradi4g04120	No alias	Ribosomal protein L2 family	0.06	Orthogroups_2024-Update
Brara.A00238.1	No alias	component *(uL2) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
Brara.G00216.1	No alias	component *(uL2) of large ribosomal-subunit (LSU) proteome	0.04	Orthogroups_2024-Update
Brara.K01326.1	No alias	component *(uL2) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
Cre12.g535851	No alias	Ribosomal protein L2 family	0.04	Orthogroups_2024-Update
HORVU5Hr1G021730.2	No alias	component *(uL2) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
Kfl00779_0020	kfl00779_0020_v1.1	(at4g36130 : 456.0) Ribosomal protein L2 family;...	0.03	Orthogroups_2024-Update
MA_383747g0010	No alias	(at4g36130 : 235.0) Ribosomal protein L2 family;...	0.02	Orthogroups_2024-Update
Mp7g01860.1	No alias	component RPL8 of LSU proteome component	0.02	Orthogroups_2024-Update
Mp7g08730.1	No alias	component RPL8 of LSU proteome component	0.02	Orthogroups_2024-Update
Potri.007G013100	No alias	Ribosomal protein L2 family	0.03	Orthogroups_2024-Update
Pp1s37_247V6	No alias	60s ribosomal protein l2	0.06	Orthogroups_2024-Update
Seita.2G112000.1	No alias	component *(uL2) of large ribosomal-subunit (LSU) proteome	0.03	Orthogroups_2024-Update
Seita.3G330100.1	No alias	component *(uL2) of large ribosomal-subunit (LSU) proteome	0.04	Orthogroups_2024-Update
Sobic.008G135000.1	No alias	component *(uL2) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
Solyc12g005330	No alias	Ribosomal protein L2 family (AHRD V3.3 *** AT4G36130.1)	0.07	Orthogroups_2024-Update
Sopen07g032020	No alias	Ribosomal Proteins L2, C-terminal domain	0.06	Orthogroups_2024-Update
Sopen10g002530	No alias	Ribosomal Proteins L2, C-terminal domain	0.06	Orthogroups_2024-Update
Sopen12g001310	No alias	Ribosomal Proteins L2, C-terminal domain	0.05	Orthogroups_2024-Update
evm.model.contig_2057.10	No alias	(at4g36130 : 380.0) Ribosomal protein L2 family;...	0.08	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan predictions
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	InterProScan predictions
BP	GO:0006412	translation	IEA	InterProScan predictions
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0003743	translation initiation factor activity	IEP	Predicted GO
MF	GO:0003746	translation elongation factor activity	IEP	Predicted GO
MF	GO:0004298	threonine-type endopeptidase activity	IEP	Predicted GO
MF	GO:0004616	phosphogluconate dehydrogenase (decarboxylating) activity	IEP	Predicted GO
CC	GO:0005622	intracellular	IEP	Predicted GO
CC	GO:0005839	proteasome core complex	IEP	Predicted GO
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Predicted GO
BP	GO:0006098	pentose-phosphate shunt	IEP	Predicted GO
BP	GO:0006413	translational initiation	IEP	Predicted GO
BP	GO:0006414	translational elongation	IEP	Predicted GO
BP	GO:0006417	regulation of translation	IEP	Predicted GO
BP	GO:0006448	regulation of translational elongation	IEP	Predicted GO
BP	GO:0006449	regulation of translational termination	IEP	Predicted GO
BP	GO:0006450	regulation of translational fidelity	IEP	Predicted GO
BP	GO:0006452	translational frameshifting	IEP	Predicted GO
BP	GO:0006739	NADP metabolic process	IEP	Predicted GO
MF	GO:0008135	translation factor activity, RNA binding	IEP	Predicted GO
BP	GO:0009891	positive regulation of biosynthetic process	IEP	Predicted GO
BP	GO:0009893	positive regulation of metabolic process	IEP	Predicted GO
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	Predicted GO
BP	GO:0010608	posttranscriptional regulation of gene expression	IEP	Predicted GO
BP	GO:0010628	positive regulation of gene expression	IEP	Predicted GO
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	IEP	Predicted GO
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	Predicted GO
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	Predicted GO
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	Predicted GO
BP	GO:0032268	regulation of cellular protein metabolic process	IEP	Predicted GO
BP	GO:0032270	positive regulation of cellular protein metabolic process	IEP	Predicted GO
CC	GO:0032993	protein-DNA complex	IEP	Predicted GO
BP	GO:0034248	regulation of cellular amide metabolic process	IEP	Predicted GO
BP	GO:0034250	positive regulation of cellular amide metabolic process	IEP	Predicted GO
MF	GO:0043021	ribonucleoprotein complex binding	IEP	Predicted GO
MF	GO:0043022	ribosome binding	IEP	Predicted GO
BP	GO:0043243	positive regulation of protein complex disassembly	IEP	Predicted GO
BP	GO:0043244	regulation of protein complex disassembly	IEP	Predicted GO
CC	GO:0044427	chromosomal part	IEP	Predicted GO
CC	GO:0044815	DNA packaging complex	IEP	Predicted GO
MF	GO:0044877	protein-containing complex binding	IEP	Predicted GO
BP	GO:0045727	positive regulation of translation	IEP	Predicted GO
BP	GO:0045901	positive regulation of translational elongation	IEP	Predicted GO
BP	GO:0045905	positive regulation of translational termination	IEP	Predicted GO
BP	GO:0048518	positive regulation of biological process	IEP	Predicted GO
BP	GO:0048522	positive regulation of cellular process	IEP	Predicted GO
BP	GO:0051128	regulation of cellular component organization	IEP	Predicted GO
BP	GO:0051130	positive regulation of cellular component organization	IEP	Predicted GO
BP	GO:0051156	glucose 6-phosphate metabolic process	IEP	Predicted GO
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0051246	regulation of protein metabolic process	IEP	Predicted GO
BP	GO:0051247	positive regulation of protein metabolic process	IEP	Predicted GO
MF	GO:0070003	threonine-type peptidase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR022669	Ribosomal_L2_C	98	230
IPR022666	Rbsml_prot_L2_RNA-bd_dom	13	90

External Links

No external refs found!

Glyma.11G076000

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation