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  5. Glyma.11G097400

Glyma.11G097400


Description : rho guanyl-nucleotide exchange factor 1


Gene families : OG_42_0000202 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000202_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.11G097400
Cluster HCCA clusters: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
A4A49_26929 No alias rop guanine nucleotide exchange factor 12 0.03 Orthogroups_2024-Update
Bradi3g10080 No alias RHO guanyl-nucleotide exchange factor 8 0.03 Orthogroups_2024-Update
Brara.E00485.1 No alias RopGEF guanine nucleotide exchange factor *(PRONE) 0.03 Orthogroups_2024-Update
Brara.G00578.1 No alias RopGEF guanine nucleotide exchange factor *(PRONE) 0.03 Orthogroups_2024-Update
Brara.K01428.1 No alias RopGEF guanine nucleotide exchange factor *(PRONE) 0.03 Orthogroups_2024-Update
MA_10428244g0010 No alias (at4g38430 : 337.0) Member of the RopGEF (guanine... 0.03 Orthogroups_2024-Update
MA_66695g0010 No alias (at5g02010 : 540.0) Encodes a member of KPP-like gene... 0.03 Orthogroups_2024-Update
Potri.001G127300 No alias RHO guanyl-nucleotide exchange factor 14 0.03 Orthogroups_2024-Update
Seita.2G314800.1 No alias RopGEF guanine nucleotide exchange factor *(PRONE) 0.02 Orthogroups_2024-Update
Seita.3G221100.1 No alias RopGEF guanine nucleotide exchange factor *(PRONE) 0.01 Orthogroups_2024-Update
Sobic.003G356600.1 No alias RopGEF guanine nucleotide exchange factor *(PRONE) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
CC GO:0000123 histone acetyltransferase complex IEP Predicted GO
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004418 hydroxymethylbilane synthase activity IEP Predicted GO
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Predicted GO
MF GO:0005542 folic acid binding IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006098 pentose-phosphate shunt IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0007155 cell adhesion IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
BP GO:0019684 photosynthesis, light reaction IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0019915 lipid storage IEP Predicted GO
BP GO:0022610 biological adhesion IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0034227 tRNA thio-modification IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0051156 glucose 6-phosphate metabolic process IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
CC GO:0070461 SAGA-type complex IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:0072341 modified amino acid binding IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR005512 PRONE_dom 193 561
No external refs found!