Sopen09g034980

Description : Light regulated protein Lir1

Gene families : OG_42_0007858 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007858_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen09g034980
Cluster	HCCA clusters: Cluster_103

Target	Alias	Description	ECC score	Gene Family Method
Glyma.16G049000	No alias	CCR-like	0.03	Orthogroups_2024-Update
PSME_00049784-RA	No alias	(at3g26740 : 96.3) transcripts are differentially...	0.03	Orthogroups_2024-Update
Solyc09g092110	No alias	Light-regulated (AHRD V3.3 *** A0A0B0P5I2_GOSAR)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0009507	chloroplast	IEA	InterProScan predictions
CC	GO:0009536	plastid	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR009856	Lir1	16	122

External Links

No external refs found!