Glyma.11G118600


Description : coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative


Gene families : OG_42_0003878 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003878_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.11G118600
Cluster HCCA clusters: Cluster_484

Target Alias Description ECC score Gene Family Method Actions
Cre06.g310750 No alias coatomer gamma-2 subunit, putative / gamma-2 coat... 0.02 Orthogroups_2024-Update
HORVU1Hr1G042050.17 No alias subunit gamma of cargo adaptor F-subcomplex 0.04 Orthogroups_2024-Update
HORVU4Hr1G065380.1 No alias subunit gamma of cargo adaptor F-subcomplex 0.03 Orthogroups_2024-Update
Kfl00637_0070 kfl00637_0070_v1.1 (at4g34450 : 1191.0) coatomer gamma-2 subunit, putative... 0.02 Orthogroups_2024-Update
PSME_00017732-RA No alias (at4g34450 : 1333.0) coatomer gamma-2 subunit, putative... 0.03 Orthogroups_2024-Update
Pp1s15_298V6 No alias coatomer protein gamma-subunit 0.04 Orthogroups_2024-Update
Pp1s276_96V6 No alias coatomer protein gamma-subunit 0.03 Orthogroups_2024-Update
Pp1s41_154V6 No alias coatomer protein gamma-subunit 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA InterProScan predictions
BP GO:0006886 intracellular protein transport IEA InterProScan predictions
BP GO:0016192 vesicle-mediated transport IEA InterProScan predictions
CC GO:0030117 membrane coat IEA InterProScan predictions
CC GO:0030126 COPI vesicle coat IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005856 cytoskeleton IEP Predicted GO
CC GO:0005885 Arp2/3 protein complex IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0007015 actin filament organization IEP Predicted GO
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
BP GO:0010638 positive regulation of organelle organization IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
CC GO:0015629 actin cytoskeleton IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
BP GO:0030832 regulation of actin filament length IEP Predicted GO
BP GO:0030833 regulation of actin filament polymerization IEP Predicted GO
BP GO:0030838 positive regulation of actin filament polymerization IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
BP GO:0031334 positive regulation of protein complex assembly IEP Predicted GO
BP GO:0032271 regulation of protein polymerization IEP Predicted GO
BP GO:0032273 positive regulation of protein polymerization IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0032535 regulation of cellular component size IEP Predicted GO
BP GO:0032956 regulation of actin cytoskeleton organization IEP Predicted GO
BP GO:0032970 regulation of actin filament-based process IEP Predicted GO
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Predicted GO
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043254 regulation of protein complex assembly IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044087 regulation of cellular component biogenesis IEP Predicted GO
BP GO:0044089 positive regulation of cellular component biogenesis IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
BP GO:0045010 actin nucleation IEP Predicted GO
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
BP GO:0051130 positive regulation of cellular component organization IEP Predicted GO
BP GO:0051493 regulation of cytoskeleton organization IEP Predicted GO
BP GO:0051495 positive regulation of cytoskeleton organization IEP Predicted GO
BP GO:0090066 regulation of anatomical structure size IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
BP GO:0097435 supramolecular fiber organization IEP Predicted GO
BP GO:0110053 regulation of actin filament organization IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1902903 regulation of supramolecular fiber organization IEP Predicted GO
BP GO:1902905 positive regulation of supramolecular fiber organization IEP Predicted GO
InterPro domains Description Start Stop
IPR002553 Clathrin/coatomer_adapt-like_N 29 540
IPR032154 Coatomer_g_Cpla 770 884
IPR013040 Coatomer_gsu_app_Ig-like_dom 622 767
No external refs found!