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  5. Sopen09g035240

Sopen09g035240


Description : 3'-5' exonuclease


Gene families : OG_42_0000433 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000433_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen09g035240
Cluster HCCA clusters: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
GRMZM5G827207 No alias Polynucleotidyl transferase, ribonuclease H-like... 0.02 Orthogroups_2024-Update
MA_35762g0010 No alias (at4g13870 : 99.8) Encodes a protein with homology to... 0.03 Orthogroups_2024-Update
Seita.2G004100.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
BP GO:0006139 nucleobase-containing compound metabolic process IEA InterProScan predictions
MF GO:0008408 3'-5' exonuclease activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002562 3'-5'_exonuclease_dom 125 293
No external refs found!