1. Home
  2. Species
  3. Glycine max
  4. Sequence
  5. Glyma.11G141700

Glyma.11G141700


Description : Histone superfamily protein


Gene families : OG_42_0000153 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000153_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.11G141700
Cluster HCCA clusters: Cluster_391

Target Alias Description ECC score Gene Family Method Actions
A4A49_60323 No alias putative histone h2b.1 0.02 Orthogroups_2024-Update
Bradi1g08860 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Bradi2g23230 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g54520 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Brara.G01398.1 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
Cre06.g275800 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G046841 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G141432 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
GRMZM2G305027 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G306258 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G401147 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.11G141600 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G142100 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Glyma.12G179100 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G191600 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G058440.4 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
HORVU3Hr1G013680.1 No alias histone *(H2B) 0.02 Orthogroups_2024-Update
HORVU4Hr1G073130.1 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
HORVU7Hr1G110310.1 No alias histone *(H2B) 0.02 Orthogroups_2024-Update
MA_1011737g0010 No alias (at3g45980 : 145.0) Encodes a histone 2B (H2B) protein.... 0.03 Orthogroups_2024-Update
MA_1040421g0010 No alias (at3g45980 : 114.0) Encodes a histone 2B (H2B) protein.... 0.06 Orthogroups_2024-Update
MA_10428006g0010 No alias (at3g45980 : 145.0) Encodes a histone 2B (H2B) protein.... 0.05 Orthogroups_2024-Update
MA_10435143g0020 No alias (at3g45980 : 145.0) Encodes a histone 2B (H2B) protein.... 0.05 Orthogroups_2024-Update
MA_10436516g0020 No alias (at3g45980 : 175.0) Encodes a histone 2B (H2B) protein.... 0.04 Orthogroups_2024-Update
MA_10436516g0030 No alias (at3g45980 : 106.0) Encodes a histone 2B (H2B) protein.... 0.03 Orthogroups_2024-Update
Seita.5G107300.1 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
Sobic.002G138000.1 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
Solyc06g074780 No alias Histone H2B (AHRD V3.3 *** K4C9J5_SOLLC) 0.03 Orthogroups_2024-Update
evm.model.tig00000944.18 No alias (p16868|h2b4_volca : 122.0) Histone H2B.4 (H2B-IV) -... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004797 thymidine kinase activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
MF GO:0019136 deoxynucleoside kinase activity IEP Predicted GO
MF GO:0019205 nucleobase-containing compound kinase activity IEP Predicted GO
MF GO:0019206 nucleoside kinase activity IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 4 124
No external refs found!