Description : Histone superfamily protein
Gene families : OG_42_0000153 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000153_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Glycine release: Glyma.11G141700 | |
Cluster | HCCA clusters: Cluster_391 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_60323 | No alias | putative histone h2b.1 | 0.02 | Orthogroups_2024-Update | |
Bradi1g08860 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Bradi2g23230 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Bradi3g54520 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Brara.G01398.1 | No alias | histone *(H2B) | 0.03 | Orthogroups_2024-Update | |
Cre06.g275800 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
GRMZM2G046841 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
GRMZM2G141432 | No alias | Histone superfamily protein | 0.05 | Orthogroups_2024-Update | |
GRMZM2G305027 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
GRMZM2G306258 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
GRMZM2G401147 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
Glyma.11G141600 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.11G142100 | No alias | Histone superfamily protein | 0.05 | Orthogroups_2024-Update | |
Glyma.12G179100 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.20G191600 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
HORVU1Hr1G058440.4 | No alias | histone *(H2B) | 0.03 | Orthogroups_2024-Update | |
HORVU3Hr1G013680.1 | No alias | histone *(H2B) | 0.02 | Orthogroups_2024-Update | |
HORVU4Hr1G073130.1 | No alias | histone *(H2B) | 0.03 | Orthogroups_2024-Update | |
HORVU7Hr1G110310.1 | No alias | histone *(H2B) | 0.02 | Orthogroups_2024-Update | |
MA_1011737g0010 | No alias | (at3g45980 : 145.0) Encodes a histone 2B (H2B) protein.... | 0.03 | Orthogroups_2024-Update | |
MA_1040421g0010 | No alias | (at3g45980 : 114.0) Encodes a histone 2B (H2B) protein.... | 0.06 | Orthogroups_2024-Update | |
MA_10428006g0010 | No alias | (at3g45980 : 145.0) Encodes a histone 2B (H2B) protein.... | 0.05 | Orthogroups_2024-Update | |
MA_10435143g0020 | No alias | (at3g45980 : 145.0) Encodes a histone 2B (H2B) protein.... | 0.05 | Orthogroups_2024-Update | |
MA_10436516g0020 | No alias | (at3g45980 : 175.0) Encodes a histone 2B (H2B) protein.... | 0.04 | Orthogroups_2024-Update | |
MA_10436516g0030 | No alias | (at3g45980 : 106.0) Encodes a histone 2B (H2B) protein.... | 0.03 | Orthogroups_2024-Update | |
Seita.5G107300.1 | No alias | histone *(H2B) | 0.03 | Orthogroups_2024-Update | |
Sobic.002G138000.1 | No alias | histone *(H2B) | 0.03 | Orthogroups_2024-Update | |
Solyc06g074780 | No alias | Histone H2B (AHRD V3.3 *** K4C9J5_SOLLC) | 0.03 | Orthogroups_2024-Update | |
evm.model.tig00000944.18 | No alias | (p16868|h2b4_volca : 122.0) Histone H2B.4 (H2B-IV) -... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEA | InterProScan predictions |
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004797 | thymidine kinase activity | IEP | Predicted GO |
MF | GO:0004857 | enzyme inhibitor activity | IEP | Predicted GO |
MF | GO:0004866 | endopeptidase inhibitor activity | IEP | Predicted GO |
BP | GO:0005984 | disaccharide metabolic process | IEP | Predicted GO |
BP | GO:0005991 | trehalose metabolic process | IEP | Predicted GO |
BP | GO:0005992 | trehalose biosynthetic process | IEP | Predicted GO |
BP | GO:0006325 | chromatin organization | IEP | Predicted GO |
BP | GO:0006334 | nucleosome assembly | IEP | Predicted GO |
BP | GO:0006720 | isoprenoid metabolic process | IEP | Predicted GO |
BP | GO:0006721 | terpenoid metabolic process | IEP | Predicted GO |
BP | GO:0008299 | isoprenoid biosynthetic process | IEP | Predicted GO |
MF | GO:0008661 | 1-deoxy-D-xylulose-5-phosphate synthase activity | IEP | Predicted GO |
BP | GO:0009311 | oligosaccharide metabolic process | IEP | Predicted GO |
BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Predicted GO |
BP | GO:0016043 | cellular component organization | IEP | Predicted GO |
BP | GO:0016114 | terpenoid biosynthetic process | IEP | Predicted GO |
MF | GO:0016744 | transferase activity, transferring aldehyde or ketonic groups | IEP | Predicted GO |
MF | GO:0019136 | deoxynucleoside kinase activity | IEP | Predicted GO |
MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Predicted GO |
MF | GO:0019206 | nucleoside kinase activity | IEP | Predicted GO |
BP | GO:0022607 | cellular component assembly | IEP | Predicted GO |
MF | GO:0030234 | enzyme regulator activity | IEP | Predicted GO |
MF | GO:0030414 | peptidase inhibitor activity | IEP | Predicted GO |
CC | GO:0031012 | extracellular matrix | IEP | Predicted GO |
BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Predicted GO |
BP | GO:0034728 | nucleosome organization | IEP | Predicted GO |
BP | GO:0043933 | protein-containing complex subunit organization | IEP | Predicted GO |
CC | GO:0044421 | extracellular region part | IEP | Predicted GO |
BP | GO:0046351 | disaccharide biosynthetic process | IEP | Predicted GO |
MF | GO:0061134 | peptidase regulator activity | IEP | Predicted GO |
MF | GO:0061135 | endopeptidase regulator activity | IEP | Predicted GO |
BP | GO:0065003 | protein-containing complex assembly | IEP | Predicted GO |
BP | GO:0065004 | protein-DNA complex assembly | IEP | Predicted GO |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Predicted GO |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Predicted GO |
MF | GO:0098772 | molecular function regulator | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007125 | Histone_H2A/H2B/H3 | 4 | 124 |
No external refs found! |