1. Home
  2. Species
  3. Glycine max
  4. Sequence
  5. Glyma.11G161500

Glyma.11G161500


Description : RING/U-box superfamily protein with ARM repeat domain


Gene families : OG_42_0002125 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.11G161500
Cluster HCCA clusters: Cluster_317

Target Alias Description ECC score Gene Family Method Actions
Glyma.18G055200 No alias RING/U-box superfamily protein with ARM repeat domain 0.04 Orthogroups_2024-Update
MA_588533g0010 No alias (at2g23140 : 593.0) RING/U-box superfamily protein with... 0.03 Orthogroups_2024-Update
Seita.6G010800.1 No alias E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Sobic.003G379800.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.007G011400.2 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
BP GO:0016567 protein ubiquitination IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004659 prenyltransferase activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
MF GO:0008318 protein prenyltransferase activity IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
BP GO:0018342 protein prenylation IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
BP GO:0097354 prenylation IEP Predicted GO
InterPro domains Description Start Stop
IPR000225 Armadillo 625 664
IPR000225 Armadillo 668 705
IPR000225 Armadillo 709 745
IPR000225 Armadillo 586 623
IPR003613 Ubox_domain 236 306
No external refs found!