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  5. Glyma.11G176500

Glyma.11G176500


Description : Homeodomain-like transcriptional regulator


Gene families : OG_42_0000088 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.11G176500
Cluster HCCA clusters: Cluster_340

Target Alias Description ECC score Gene Family Method Actions
A4A49_23978 No alias transcription factor myb1r1 0.03 Orthogroups_2024-Update
A4A49_28792 No alias transcription factor myb1r1 0.03 Orthogroups_2024-Update
At1g70000 No alias At1g70000 [Source:UniProtKB/TrEMBL;Acc:O04544] 0.03 Orthogroups_2024-Update
At3g10590 No alias Duplicated homeodomain-like superfamily protein... 0.02 Orthogroups_2024-Update
At3g11280 No alias Duplicated homeodomain-like superfamily protein... 0.03 Orthogroups_2024-Update
Bradi2g02810 No alias Duplicated homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
Bradi2g05590 No alias myb-like transcription factor family protein 0.03 Orthogroups_2024-Update
Bradi5g26110 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Brara.B01892.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Brara.C01242.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.04 Orthogroups_2024-Update
Brara.C04549.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Brara.D02327.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.04 Orthogroups_2024-Update
Brara.F00380.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.04 Orthogroups_2024-Update
GRMZM2G157306 No alias myb-like transcription factor family protein 0.04 Orthogroups_2024-Update
Glyma.05G032200 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.07G175500 No alias Duplicated homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.08G029400 No alias myb-like transcription factor family protein 0.04 Orthogroups_2024-Update
Glyma.18G030300 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G134200 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G056020.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
HORVU3Hr1G010600.2 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
HORVU7Hr1G072890.7 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.02 Orthogroups_2024-Update
LOC_Os01g63460 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g04840 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
MA_79012g0010 No alias (at1g70000 : 211.0) myb-like transcription factor family... 0.03 Orthogroups_2024-Update
PSME_00026612-RA No alias (at5g47390 : 221.0) myb-like transcription factor family... 0.04 Orthogroups_2024-Update
PSME_00051540-RA No alias (at5g47390 : 215.0) myb-like transcription factor family... 0.03 Orthogroups_2024-Update
Potri.003G079500 No alias myb-like transcription factor family protein 0.03 Orthogroups_2024-Update
Potri.012G060300 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Seita.6G065500.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.04 Orthogroups_2024-Update
Seita.9G319600.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Sobic.001G297500.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Sobic.003G076600.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Sobic.007G037100.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.05 Orthogroups_2024-Update
Sobic.009G024700.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.02 Orthogroups_2024-Update
Sobic.009G157500.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Solyc08g078340 No alias MYB transcription factor (AHRD V3.3 *** T2DNE9_PHAVU) 0.05 Orthogroups_2024-Update
Solyc12g044610 No alias Myb transcription factor (AHRD V3.3 *** B1Q4U5_BRUGY) 0.04 Orthogroups_2024-Update
Sopen06g027540 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen09g007130 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen12g023090 No alias Myb-like DNA-binding domain 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 32 76
IPR001005 SANT/Myb 140 184
No external refs found!