Sopen09g035760

Description : Oligonucleotide/oligosaccharide-binding (OB)-fold

Gene families : OG_42_0000210 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000210_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen09g035760
Cluster	HCCA clusters: Cluster_326

Target	Alias	Description	ECC score	Gene Family Method
Brara.I04306.1	No alias	RNA helicase Prp43 of Intron-Lariat Spliceosome complex	0.02	Orthogroups_2024-Update
Kfl00133_0140	kfl00133_0140_v1.1	(at3g62310 : 1153.0) RNA helicase family protein;...	0.02	Orthogroups_2024-Update
Potri.008G096800	No alias	RNA helicase family protein	0.03	Orthogroups_2024-Update
Sobic.003G124600.1	No alias	RNA helicase *(Prp2)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001650	Helicase_C	268	392
IPR011709	DUF1605	602	681
IPR007502	Helicase-assoc_dom	455	541

External Links

No external refs found!