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  5. Sopen09g035780

Sopen09g035780


Description : PPR repeat family


Gene families : OG_42_0009813 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009813_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen09g035780
Cluster HCCA clusters: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
Solyc09g097840 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 298 346
IPR002885 Pentatricopeptide_repeat 373 416
IPR002885 Pentatricopeptide_repeat 227 257
IPR002885 Pentatricopeptide_repeat 271 296
IPR002885 Pentatricopeptide_repeat 166 191
IPR002885 Pentatricopeptide_repeat 197 224
No external refs found!