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  5. Glyma.11G192900

Glyma.11G192900


Description : CHY-type/CTCHY-type/RING-type Zinc finger protein


Gene families : OG_42_0001040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.11G192900
Cluster HCCA clusters: Cluster_436

Target Alias Description ECC score Gene Family Method Actions
Brara.B03627.1 No alias E3 ubiquitin ligase *(CHY) 0.03 Orthogroups_2024-Update
MA_126866g0010 No alias (at5g25560 : 439.0) CHY-type/CTCHY-type/RING-type Zinc... 0.02 Orthogroups_2024-Update
Potri.009G005700 No alias CHY-type/CTCHY-type/RING-type Zinc finger protein 0.03 Orthogroups_2024-Update
Sobic.001G373100.1 No alias E3 ubiquitin ligase *(CHY) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR027370 Znf-RING_LisH 174 214
IPR039512 RCHY1_zinc-ribbon 221 279
IPR008913 Znf_CHY 38 119
No external refs found!