1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen09g036050

Sopen09g036050


Description : Helix-loop-helix DNA-binding domain


Gene families : OG_42_0000702 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000702_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen09g036050
Cluster HCCA clusters: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
A4A49_15975 No alias transcription factor bhlh130 0.03 Orthogroups_2024-Update
A4A49_28561 No alias transcription factor bhlh130 0.03 Orthogroups_2024-Update
A4A49_35650 No alias transcription factor bhlh128 0.03 Orthogroups_2024-Update
Brara.C02187.1 No alias bHLH-type transcription factor 0.04 Orthogroups_2024-Update
Brara.D02568.1 No alias transcriptional co-activator *(FBH) & bHLH-type... 0.02 Orthogroups_2024-Update
Brara.F00266.1 No alias transcriptional co-activator *(FBH) & bHLH-type... 0.02 Orthogroups_2024-Update
Brara.I02386.1 No alias transcriptional co-activator *(FBH) & bHLH-type... 0.02 Orthogroups_2024-Update
Glyma.20G248100 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G073240.2 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
PSME_00041383-RA No alias (at1g35460 : 145.0) basic helix-loop-helix (bHLH)... 0.02 Orthogroups_2024-Update
Potri.002G231700 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.014G150600 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Pp1s34_227V6 No alias F12A4.2; basic helix-loop-helix (bHLH) family protein... 0.02 Orthogroups_2024-Update
Pp1s83_128V6 No alias dna binding 0.03 Orthogroups_2024-Update
Seita.2G252900.1 No alias transcriptional co-activator *(FBH) & bHLH-type... 0.05 Orthogroups_2024-Update
Sopen10g029690 No alias Helix-loop-helix DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 286 348
No external refs found!