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  5. Glyma.11G219400

Glyma.11G219400


Description : Barwin-like endoglucanases superfamily protein


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.11G219400
Cluster HCCA clusters: Cluster_398

Target Alias Description ECC score Gene Family Method Actions
Glyma.14G203900 No alias expansin A8 0.03 Orthogroups_2024-Update
Kfl00557_g9 kfl00557_g9_v1.1 (at1g12560 : 146.0) Member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
Mp2g18600.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
PSME_00052223-RA No alias (at1g69530 : 360.0) Member of Alpha-Expansin Gene... 0.04 Orthogroups_2024-Update
Potri.017G140000 No alias expansin A13 0.02 Orthogroups_2024-Update
Pp1s9_119V6 No alias alpha-expansin 15 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 165 242
IPR009009 RlpA-like_DPBB 67 154
No external refs found!