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  5. Glyma.11G227900

Glyma.11G227900


Description : eukaryotic translation initiation factor 2


Gene families : OG_42_0003671 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003671_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.11G227900
Cluster HCCA clusters: Cluster_329

Target Alias Description ECC score Gene Family Method Actions
LOC_Os05g01450 No alias eukaryotic translation initiation factor 3 subunit F,... 0.02 Orthogroups_2024-Update
Sobic.009G212300.1 No alias component *(eIF3f) of eIF3 mRNA-to-PIC binding complex 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR024969 Rpn11/EIF3F_C 175 281
IPR000555 JAMM/MPN+_dom 21 126
No external refs found!