Sopen09g036190

Description : PHD-zinc-finger like domain

Gene families : OG_42_0005500 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005500_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen09g036190
Cluster	HCCA clusters: Cluster_200

Target	Alias	Description	ECC score	Gene Family Method	Actions
Brara.I05436.1	No alias	class-III histone methyltransferase *(Trx)	0.03	Orthogroups_2024-Update
Glyma.08G258500	No alias	trithorax-like protein 2	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003889	FYrich_C	706	781
IPR001214	SET_dom	1127	1233
IPR000313	PWWP_dom	505	594
IPR003888	FYrich_N	647	697

External Links

No external refs found!