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  5. Glyma.11G242500

Glyma.11G242500


Description : RING/U-box superfamily protein


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.11G242500
Cluster HCCA clusters: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
A4A49_18667 No alias ring-h2 finger protein atl18 0.03 Orthogroups_2024-Update
A4A49_21361 No alias ring-h2 finger protein atl78 0.04 Orthogroups_2024-Update
A4A49_27114 No alias ring-h2 finger protein atl54 0.05 Orthogroups_2024-Update
A4A49_29197 No alias ring-h2 finger protein atl73 0.03 Orthogroups_2024-Update
A4A49_31261 No alias ring-h2 finger protein atl70 0.03 Orthogroups_2024-Update
A4A49_37314 No alias e3 ubiquitin-protein ligase atl9 0.02 Orthogroups_2024-Update
At1g35330 No alias RING/U-box superfamily protein [Source:TAIR;Acc:AT1G35330] 0.03 Orthogroups_2024-Update
At1g72220 No alias RING-H2 finger protein ATL54... 0.03 Orthogroups_2024-Update
At2g35000 No alias E3 ubiquitin-protein ligase ATL9... 0.03 Orthogroups_2024-Update
At3g11110 No alias RING-H2 finger protein ATL66... 0.03 Orthogroups_2024-Update
At5g10380 No alias E3 ubiquitin-protein ligase RING1... 0.04 Orthogroups_2024-Update
At5g41450 No alias RING/U-box superfamily protein... 0.03 Orthogroups_2024-Update
Bradi1g29611 No alias RING-H2 finger A3A 0.02 Orthogroups_2024-Update
Bradi1g45727 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi1g46750 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi2g22650 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g09395 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g46030 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g60770 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi4g13960 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Bradi5g19960 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Brara.A00708.1 No alias regulatory E3 ubiquitin ligase targeted to IRT1 *(IDF1) 0.03 Orthogroups_2024-Update
Brara.A03446.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.E00038.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.E00283.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.E01886.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.E02317.1 No alias regulatory ubiquitin-protein ligase *(PRU2) &... 0.03 Orthogroups_2024-Update
Brara.F01484.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.I02588.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.06 Orthogroups_2024-Update
GRMZM2G004519 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G041549 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G135011 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G171277 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G480106 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.03G203400 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.03G263000 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.05G175400 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.06G150400 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G042400 No alias TOXICOS EN LEVADURA 2 0.05 Orthogroups_2024-Update
Glyma.10G156500 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.10G289100 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G121400 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G208600 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.13G108500 No alias RING/U-box superfamily protein 0.06 Orthogroups_2024-Update
Glyma.14G177900 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G025700 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G010400 No alias hypoxia-responsive family protein / zinc finger... 0.03 Orthogroups_2024-Update
HORVU0Hr1G021450.9 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G074210.1 No alias regulatory ubiquitin-protein ligase *(PRU2) 0.03 Orthogroups_2024-Update
HORVU5Hr1G096480.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G042940.1 No alias Unknown function 0.05 Orthogroups_2024-Update
HORVU7Hr1G080020.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
LOC_Os01g11500 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g61470 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g34230 No alias RING-H2 finger protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g37740 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g11450 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_10431388g0020 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_10436208g0010 No alias (at1g72200 : 100.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_12352g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_12363g0010 No alias (at1g72310 : 126.0) Encodes a putative RING-H2 zinc... 0.03 Orthogroups_2024-Update
MA_25345g0010 No alias (at1g49230 : 107.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_2679g0010 No alias (at3g16720 : 111.0) RING-H2 protein induced after... 0.02 Orthogroups_2024-Update
MA_308999g0010 No alias (at1g72310 : 80.9) Encodes a putative RING-H2 zinc... 0.03 Orthogroups_2024-Update
MA_37578g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_38494g0010 No alias (at1g49230 : 119.0) RING/U-box superfamily protein;... 0.04 Orthogroups_2024-Update
MA_5319g0010 No alias (at1g49230 : 120.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
MA_634100g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_6697g0010 No alias (at1g72310 : 120.0) Encodes a putative RING-H2 zinc... 0.02 Orthogroups_2024-Update
MA_6934973g0010 No alias (at5g01880 : 125.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_81046g0010 No alias (at1g49230 : 127.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
MA_85088g0010 No alias (at1g49230 : 131.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
MA_8693914g0010 No alias (at5g05280 : 130.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
PSME_00003016-RA No alias (at1g72200 : 114.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
PSME_00051567-RA No alias (at3g16720 : 108.0) RING-H2 protein induced after... 0.02 Orthogroups_2024-Update
Potri.003G073300 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.003G093100 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.005G255200 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Potri.006G144200 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.007G057300 No alias RING-H2 finger A3A 0.04 Orthogroups_2024-Update
Potri.008G018900 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Potri.008G219200 No alias TOXICOS EN LEVADURA 2 0.02 Orthogroups_2024-Update
Potri.009G110000 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.012G003900 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.013G025800 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.013G073500 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Potri.013G157000 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.019G091400 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Pp1s71_162V6 No alias ring finger 0.02 Orthogroups_2024-Update
Seita.1G197500.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.1G203900.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Seita.2G390800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G309700.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.6G186400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.7G095300.1 No alias regulatory ubiquitin-protein ligase *(PRU2) &... 0.03 Orthogroups_2024-Update
Seita.7G205000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Seita.9G336200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.002G232800.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.003G147301.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G181200.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.004G187800.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Sobic.004G283400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Sobic.004G305000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.005G036400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.009G110400.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Solyc05g055140 No alias RING/U-box superfamily protein (AHRD V3.3 *** A0A061FQW5_THECC) 0.03 Orthogroups_2024-Update
Solyc12g087840 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen08g025350 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen12g024180 No alias Ring finger domain 0.03 Orthogroups_2024-Update
evm.model.tig00001128.32 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0004474 malate synthase activity IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006097 glyoxylate cycle IEP Predicted GO
BP GO:0006275 regulation of DNA replication IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
MF GO:0008172 S-methyltransferase activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009086 methionine biosynthetic process IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:0046487 glyoxylate metabolic process IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051052 regulation of DNA metabolic process IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 159 202
No external refs found!