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  5. Glyma.11G252300

Glyma.11G252300


Description : K-box region and MADS-box transcription factor family protein


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.11G252300
Cluster HCCA clusters: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
A4A49_18078 No alias developmental protein sepallata 1 0.04 Orthogroups_2024-Update
At4g36590 No alias MADS-box protein [Source:UniProtKB/TrEMBL;Acc:O23222] 0.03 Orthogroups_2024-Update
Bradi1g08340 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Bradi2g38695 No alias MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Bradi4g34680 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Brara.J01588.1 No alias component *(PISTILLATA) of AP3-PISTILLATA organ-identity... 0.03 Orthogroups_2024-Update
GRMZM2G171365 No alias AGAMOUS-like 20 0.03 Orthogroups_2024-Update
Glyma.01G020500 No alias AGAMOUS-like 21 0.03 Orthogroups_2024-Update
Glyma.02G179300 No alias AGAMOUS-like 62 0.02 Orthogroups_2024-Update
Glyma.03G019300 No alias AGAMOUS-like 20 0.03 Orthogroups_2024-Update
Glyma.18G273600 No alias AGAMOUS-like 8 0.03 Orthogroups_2024-Update
HORVU1Hr1G063620.2 No alias component *(PISTILLATA) of AP3-PISTILLATA organ-identity... 0.02 Orthogroups_2024-Update
HORVU5Hr1G110470.1 No alias MADS/AGL-type transcription factor 0.05 Orthogroups_2024-Update
HORVU6Hr1G002270.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
HORVU7Hr1G054390.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os05g11414 No alias OsMADS58 - MADS-box family gene with MIKCc type-box, expressed 0.03 Orthogroups_2024-Update
MA_17919g0010 No alias (q6eu39|mads6_orysa : 111.0) MADS-box transcription... 0.03 Orthogroups_2024-Update
MA_35712g0010 No alias (at4g11880 : 102.0) AGL12, AGL14, and AGL17 are all... 0.03 Orthogroups_2024-Update
Potri.004G002400 No alias AGAMOUS-like 62 0.04 Orthogroups_2024-Update
Potri.005G150501 No alias AGAMOUS-like 16 0.03 Orthogroups_2024-Update
Sobic.010G221500.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Solyc04g076700 No alias MADS-box transcription factor (AHRD V3.3 *** G7IS85_MEDTR) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002487 TF_Kbox 94 175
IPR002100 TF_MADSbox 10 57
No external refs found!