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  5. Glyma.12G004400

Glyma.12G004400


Description : Plant invertase/pectin methylesterase inhibitor superfamily


Gene families : OG_42_0000066 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.12G004400
Cluster HCCA clusters: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
101118 No alias pectin methylesterase PCR fragment F 0.02 Orthogroups_2024-Update
Brara.J00839.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.01G138000 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Orthogroups_2024-Update
Glyma.01G138100 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Orthogroups_2024-Update
PSME_00048380-RA No alias (at4g02330 : 476.0) ATPMEPCRB; FUNCTIONS IN:... 0.04 Orthogroups_2024-Update
PSME_00056054-RA No alias (at4g02330 : 471.0) ATPMEPCRB; FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
Potri.010G109400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
Potri.T148300 No alias pectin methylesterase 3 0.03 Orthogroups_2024-Update
Solyc01g099940 No alias Pectinesterase (AHRD V3.3 *** K4B128_SOLLC) 0.04 Orthogroups_2024-Update
Solyc06g009190 No alias Pectinesterase (AHRD V3.3 *** K4C3U9_SOLLC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA InterProScan predictions
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 32 175
IPR000070 Pectinesterase_cat 219 516
No external refs found!