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  5. Glyma.12G022800

Glyma.12G022800


Description : expansin-like A1


Gene families : OG_42_0003075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.12G022800
Cluster HCCA clusters: Cluster_412

Target Alias Description ECC score Gene Family Method Actions
A4A49_12099 No alias expansin-like a2 0.04 Orthogroups_2024-Update
At3g45960 No alias Expansin-like A3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZT5] 0.04 Orthogroups_2024-Update
MA_467939g0010 No alias (q10s70|exla1_orysa : 263.0) Expansin-like A1 precursor... 0.02 Orthogroups_2024-Update
PSME_00004400-RA No alias (q10s70|exla1_orysa : 264.0) Expansin-like A1 precursor... 0.04 Orthogroups_2024-Update
PSME_00047324-RA No alias (at4g38400 : 280.0) member of EXPANSIN-LIKE. Naming... 0.03 Orthogroups_2024-Update
Seita.9G339600.1 No alias alpha-like-class expansin 0.03 Orthogroups_2024-Update
Seita.9G551900.1 No alias alpha-like-class expansin 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 58 134
IPR007117 Expansin_CBD 147 229
No external refs found!