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  5. Glyma.12G028900

Glyma.12G028900


Description : RING/U-box superfamily protein


Gene families : OG_42_0002605 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002605_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.12G028900
Cluster HCCA clusters: Cluster_477

Target Alias Description ECC score Gene Family Method Actions
At5g05230 No alias U-box domain-containing protein 62... 0.04 Orthogroups_2024-Update
Seita.1G377000.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Solyc04g009340 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT3G19895.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP Predicted GO
MF GO:0003910 DNA ligase (ATP) activity IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!