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  5. Sopen10g001270

Sopen10g001270


Description : PPR repeat family


Gene families : OG_42_0009188 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009188_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen10g001270
Cluster HCCA clusters: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
At1g61870 No alias Pentatricopeptide repeat-containing protein At1g61870,... 0.03 Orthogroups_2024-Update
Brara.A02572.1 No alias component *(mS76) of small mitoribosomal-subunit... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 285 327
IPR002885 Pentatricopeptide_repeat 179 228
IPR002885 Pentatricopeptide_repeat 117 141
IPR002885 Pentatricopeptide_repeat 252 282
No external refs found!