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  5. Sopen10g001480

Sopen10g001480


Description : Cation efflux family


Gene families : OG_42_0000596 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000596_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen10g001480
Cluster HCCA clusters: Cluster_221

Target Alias Description ECC score Gene Family Method Actions
96962 No alias Cation efflux family protein 0.03 Orthogroups_2024-Update
A4A49_00570 No alias metal tolerance protein 11 0.02 Orthogroups_2024-Update
A4A49_08671 No alias metal tolerance protein 4 0.04 Orthogroups_2024-Update
A4A49_11500 No alias metal tolerance protein 4 0.02 Orthogroups_2024-Update
A4A49_13368 No alias metal tolerance protein 10 0.02 Orthogroups_2024-Update
At1g16310 No alias Metal tolerance protein 10... 0.03 Orthogroups_2024-Update
Bradi2g02050 No alias Cation efflux family protein 0.04 Orthogroups_2024-Update
Bradi4g17451 No alias Cation efflux family protein 0.02 Orthogroups_2024-Update
Brara.E00624.1 No alias manganese cation transporter *(Mn-CDF) & manganese... 0.03 Orthogroups_2024-Update
Brara.F01130.1 No alias manganese cation transporter *(Mn-CDF) & manganese... 0.02 Orthogroups_2024-Update
Brara.I04010.1 No alias manganese cation transporter *(Mn-CDF) & manganese... 0.05 Orthogroups_2024-Update
Glyma.02G237633 No alias Cation efflux family protein 0.03 Orthogroups_2024-Update
Glyma.14G206600 No alias Cation efflux family protein 0.03 Orthogroups_2024-Update
Glyma.15G262400 No alias Cation efflux family protein 0.03 Orthogroups_2024-Update
MA_9347801g0010 No alias (at2g39450 : 295.0) Encodes a Golgi-localized manganese... 0.03 Orthogroups_2024-Update
Potri.010G172600 No alias Cation efflux family protein 0.03 Orthogroups_2024-Update
Potri.010G172900 No alias Cation efflux family protein 0.03 Orthogroups_2024-Update
Pp1s119_25V6 No alias mtp11 gene for putative metal tolerance protein MTP11 0.03 Orthogroups_2024-Update
Seita.5G374300.1 No alias manganese cation transporter *(Mn-CDF) & manganese... 0.02 Orthogroups_2024-Update
Sobic.001G445000.1 No alias manganese cation transporter *(Mn-CDF) & manganese... 0.03 Orthogroups_2024-Update
Sopen05g033200 No alias Cation efflux family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006812 cation transport IEA InterProScan predictions
MF GO:0008324 cation transmembrane transporter activity IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002524 Cation_efflux 128 318
IPR027470 Cation_efflux_CTD 325 399
No external refs found!