Sopen10g001510

Description : MIF4G like

Gene families : OG_42_0005756 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005756_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen10g001510
Cluster	HCCA clusters: Cluster_115

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g62590	No alias	ARM repeat superfamily protein	0.05	Orthogroups_2024-Update
Brara.C04072.1	No alias	component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex	0.02	Orthogroups_2024-Update
Cre12.g524100	No alias	ARM repeat superfamily protein	0.03	Orthogroups_2024-Update
Glyma.16G049600	No alias	ARM repeat superfamily protein	0.05	Orthogroups_2024-Update
Pp1s41_19V6	No alias	nuclear cap-binding protein	0.02	Orthogroups_2024-Update
Seita.9G406000.1	No alias	component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex	0.04	Orthogroups_2024-Update
Sobic.001G373800.1	No alias	component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex	0.06	Orthogroups_2024-Update
Solyc10g005530	No alias	ABH1 (AHRD V3.3 *** A0A097PNP2_SOLLC)	0.05	Orthogroups_2024-Update
evm.model.contig_3625.1	No alias	(at2g13540 : 107.0) Encodes a nuclear cap-binding...	0.03	Orthogroups_2024-Update
evm.model.tig00021589.24	No alias	(at2g13540 : 267.0) Encodes a nuclear cap-binding...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	IEA	InterProScan predictions
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003890	MIF4G-like_typ-3	22	218
IPR015172	MIF4G-like_typ-1	343	467
IPR015174	MIF4G-like_typ-2	501	826

External Links

No external refs found!