1. Home
  2. Species
  3. Glycine max
  4. Sequence
  5. Glyma.12G057800

Glyma.12G057800


Description : Nucleolar GTP-binding protein


Gene families : OG_42_0003813 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003813_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.12G057800
Cluster HCCA clusters: Cluster_270

Target Alias Description ECC score Gene Family Method Actions
231970 No alias Nucleolar GTP-binding protein 0.02 Orthogroups_2024-Update
At1g50920 No alias Nucleolar GTP-binding protein 1... 0.04 Orthogroups_2024-Update
Bradi1g46650 No alias Nucleolar GTP-binding protein 0.03 Orthogroups_2024-Update
Kfl00245_0010 kfl00245_0010_v1.... (at1g50920 : 781.0) Nucleolar GTP-binding protein;... 0.02 Orthogroups_2024-Update
Pp1s9_29V6 No alias nucleolar gtp-binding protein 0.02 Orthogroups_2024-Update
Seita.4G040700.1 No alias regulatory GTPase (NOG1) of LSU processome 0.04 Orthogroups_2024-Update
Sobic.010G073200.1 No alias regulatory GTPase (NOG1) of LSU processome 0.08 Orthogroups_2024-Update
Sopen01g032590 No alias NOGCT (NUC087) domain 0.03 Orthogroups_2024-Update
Sopen07g027710 No alias NOGCT (NUC087) domain 0.03 Orthogroups_2024-Update
evm.model.contig_782.2 No alias (at1g50920 : 569.0) Nucleolar GTP-binding protein;... 0.02 Orthogroups_2024-Update
evm.model.tig00021432.35 No alias (at1g50920 : 605.0) Nucleolar GTP-binding protein;... 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0001671 ATPase activator activity IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
CC GO:0005732 small nucleolar ribonucleoprotein complex IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
CC GO:0034457 Mpp10 complex IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044452 nucleolar part IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR012973 NOG_C 410 463
IPR010674 NOG1_Rossman_fold_dom 236 292
No external refs found!