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  5. Glyma.12G070300

Glyma.12G070300


Description : C2H2-like zinc finger protein


Gene families : OG_42_0000119 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.12G070300
Cluster HCCA clusters: Cluster_340

Target Alias Description ECC score Gene Family Method Actions
At2g02070 No alias Protein indeterminate-domain 5, chloroplastic... 0.04 Orthogroups_2024-Update
At3g45260 No alias Protein indeterminate-domain 9... 0.03 Orthogroups_2024-Update
Bradi1g18370 No alias C2H2-like zinc finger protein 0.04 Orthogroups_2024-Update
Brara.F03435.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Brara.G02535.1 No alias C2H2 subclass IDD transcription factor 0.04 Orthogroups_2024-Update
Brara.I02041.1 No alias C2H2 subclass IDD transcription factor 0.05 Orthogroups_2024-Update
GRMZM2G011357 No alias indeterminate(ID)-domain 12 0.03 Orthogroups_2024-Update
GRMZM2G027333 No alias indeterminate(ID)-domain 11 0.02 Orthogroups_2024-Update
Glyma.05G137000 No alias C2H2-like zinc finger protein 0.04 Orthogroups_2024-Update
Glyma.07G158000 No alias indeterminate(ID)-domain 4 0.04 Orthogroups_2024-Update
Glyma.10G280000 No alias indeterminate(ID)-domain 5 0.04 Orthogroups_2024-Update
Glyma.13G139000 No alias C2H2-like zinc finger protein 0.04 Orthogroups_2024-Update
Glyma.13G293800 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Glyma.13G327500 No alias indeterminate(ID)-domain 2 0.03 Orthogroups_2024-Update
Glyma.16G141100 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Glyma.19G180400 No alias indeterminate(ID)-domain 4 0.04 Orthogroups_2024-Update
Glyma.20G184000 No alias indeterminate(ID)-domain 4 0.04 Orthogroups_2024-Update
PSME_00021589-RA No alias (at1g68130 : 300.0) indeterminate(ID)-domain 14 (IDD14);... 0.03 Orthogroups_2024-Update
PSME_00054281-RA No alias (at1g03840 : 248.0) MGP is a nuclear-localized putative... 0.03 Orthogroups_2024-Update
Potri.006G227600 No alias indeterminate(ID)-domain 11 0.03 Orthogroups_2024-Update
Pp1s43_228V6 No alias nucleic acid binding 0.03 Orthogroups_2024-Update
Solyc06g075250 No alias Zinc finger family protein (AHRD V3.3 *** S8C619_9LAMI) 0.03 Orthogroups_2024-Update
Sopen01g042900 No alias Zinc finger, C2H2 type 0.02 Orthogroups_2024-Update
Sopen02g030250 No alias Zinc finger, C2H2 type 0.02 Orthogroups_2024-Update
Sopen03g040470 No alias Zinc finger, C2H2 type 0.04 Orthogroups_2024-Update
Sopen10g033630 No alias Zinc finger, C2H2 type 0.04 Orthogroups_2024-Update
evm.model.contig_435.15 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!