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  5. Glyma.12G071900

Glyma.12G071900


Description : zinc finger (C3HC4-type RING finger) family protein


Gene families : OG_42_0000330 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000330_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.12G071900
Cluster HCCA clusters: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
HORVU5Hr1G065280.8 No alias plant-specific E3 ubiquitin ligase *(RSL/RFA) 0.03 Orthogroups_2024-Update
Solyc01g110080 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT3G14250.1) 0.02 Orthogroups_2024-Update
Solyc03g117860 No alias RING/U-box superfamily protein (AHRD V3.3 *-* AT3G14250.1) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR002867 IBR_dom 379 428
IPR002867 IBR_dom 288 360
IPR002156 RNaseH_domain 81 199
No external refs found!