1. Home
  2. Species
  3. Glycine max
  4. Sequence
  5. Glyma.12G083500

Glyma.12G083500


Description : Argonaute family protein


Gene families : OG_42_0000134 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000134_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.12G083500
Cluster HCCA clusters: Cluster_452

Target Alias Description ECC score Gene Family Method Actions
98227 No alias Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.03 Orthogroups_2024-Update
HORVU3Hr1G021290.1 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os03g47820 No alias PINHEAD, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g47830 No alias argonaute, putative, expressed 0.03 Orthogroups_2024-Update
Potri.001G213700 No alias Argonaute family protein 0.02 Orthogroups_2024-Update
Seita.2G310800.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.9G359200.1 No alias regulatory protein *(AGO7) of transacting siRNA pathway 0.03 Orthogroups_2024-Update
Sobic.001G136150.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc12g006790 No alias Argonaute10b 0.02 Orthogroups_2024-Update
evm.model.contig_2082.8 No alias (at1g48410 : 352.0) Encodes an RNA Slicer that... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003100 PAZ_dom 323 448
IPR032472 ArgoL2 457 503
IPR032473 Argonaute_Mid_dom 514 592
IPR032474 Argonaute_N 116 257
IPR014811 ArgoL1 268 317
IPR003165 Piwi 608 925
No external refs found!