Glyma.12G086300

Description : tRNAisopentenyltransferase 2

Gene families : OG_42_0000391 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000391_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.12G086300
Cluster	HCCA clusters: Cluster_332

Target	Alias	Description	ECC score	Gene Family Method
A4A49_26050	No alias	adenylate isopentenyltransferase 3, chloroplastic	0.03	Orthogroups_2024-Update
Bradi1g04580	No alias	isopentenyltransferase 5	0.03	Orthogroups_2024-Update
Brara.G00714.1	No alias	IP-type-cytokinin synthase *(IPT) & EC_2.5 transferase...	0.04	Orthogroups_2024-Update
Brara.J01679.1	No alias	IP-type-cytokinin synthase *(IPT) & EC_2.5 transferase...	0.02	Orthogroups_2024-Update
Glyma.02G148600	No alias	isopentenyltransferase 3	0.03	Orthogroups_2024-Update
Glyma.03G151800	No alias	isopentenyltransferase 3	0.05	Orthogroups_2024-Update
Glyma.07G256700	No alias	isopentenyltransferase 5	0.04	Orthogroups_2024-Update
Glyma.10G025300	No alias	isopentenyltransferase 3	0.04	Orthogroups_2024-Update
Sopen04g002300	No alias	IPP transferase	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004474	malate synthase activity	IEP	Predicted GO
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Predicted GO
BP	GO:0006097	glyoxylate cycle	IEP	Predicted GO
BP	GO:0009719	response to endogenous stimulus	IEP	Predicted GO
BP	GO:0009725	response to hormone	IEP	Predicted GO
BP	GO:0009733	response to auxin	IEP	Predicted GO
BP	GO:0010033	response to organic substance	IEP	Predicted GO
BP	GO:0042221	response to chemical	IEP	Predicted GO
BP	GO:0046487	glyoxylate metabolic process	IEP	Predicted GO
MF	GO:0046912	transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR018022	IPT	15	145

External Links

No external refs found!