Glyma.12G096900

Description : cellulose synthase-like B3

Gene families : OG_42_0000159 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000159_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.12G096900
Cluster	HCCA clusters: Cluster_275

Target	Alias	Description	ECC score	Gene Family Method
A4A49_05739	No alias	hypothetical protein	0.04	Orthogroups_2024-Update
A4A49_16242	No alias	putative cellulose synthase a catalytic subunit 3 [udp-forming]	0.03	Orthogroups_2024-Update
At4g18780	No alias	Cellulose synthase (Fragment)...	0.04	Orthogroups_2024-Update
Bradi1g53207	No alias	cellulose synthase 6	0.02	Orthogroups_2024-Update
Bradi3g28350	No alias	cellulose synthase A4	0.03	Orthogroups_2024-Update
Brara.F03770.1	No alias	catalytic component *(CesA) of cellulose synthase complex	0.03	Orthogroups_2024-Update
Glyma.06G069600	No alias	cellulose synthase 1	0.06	Orthogroups_2024-Update
Glyma.09G103000	No alias	Cellulose synthase family protein	0.03	Orthogroups_2024-Update
Glyma.12G191700	No alias	cellulose synthase-like B3	0.04	Orthogroups_2024-Update
Glyma.13G202500	No alias	Cellulose synthase family protein	0.04	Orthogroups_2024-Update
Glyma.13G310300	No alias	cellulose synthase-like B3	0.05	Orthogroups_2024-Update
Kfl00459_0080	kfl00459_0080_v1.1	(at4g32410 : 1050.0) Encodes a cellulose synthase...	0.02	Orthogroups_2024-Update
MA_10429177g0010	No alias	(at4g18780 : 1268.0) Encodes a member of the cellulose...	0.03	Orthogroups_2024-Update
Mp7g07800.1	No alias	catalytic component CesA of cellulose synthase complex	0.03	Orthogroups_2024-Update
Potri.005G194200	No alias	cellulose synthase A9	0.03	Orthogroups_2024-Update
Potri.006G181900	No alias	Cellulose synthase family protein	0.03	Orthogroups_2024-Update
Potri.007G076500	No alias	cellulose synthase 6	0.03	Orthogroups_2024-Update
Pp1s8_137V6	No alias	cellulose synthase glycosyltransferase family 2	0.02	Orthogroups_2024-Update
Seita.2G099400.1	No alias	catalytic component *(CesA) of cellulose synthase complex	0.03	Orthogroups_2024-Update
Seita.5G319100.1	No alias	catalytic component *(CesA) of cellulose synthase complex	0.03	Orthogroups_2024-Update
Sobic.002G094600.1	No alias	catalytic component *(CesA) of cellulose synthase complex	0.03	Orthogroups_2024-Update
Sobic.003G296400.1	No alias	catalytic component *(CesA) of cellulose synthase complex	0.02	Orthogroups_2024-Update
Sobic.009G063400.1	No alias	catalytic component *(CesA) of cellulose synthase complex	0.04	Orthogroups_2024-Update
Solyc01g087210	No alias	Cellulose synthase family protein (AHRD V3.3 *** AT5G05170.1)	0.04	Orthogroups_2024-Update
Solyc04g071650	No alias	Cellulose synthase (AHRD V3.3 *** M1A8I3_SOLTU)	0.03	Orthogroups_2024-Update
Solyc07g051820	No alias	Cellulose synthase family protein (AHRD V3.3 *** B9GTW0_POPTR)	0.03	Orthogroups_2024-Update
Sopen01g034270	No alias	Cellulose synthase	0.03	Orthogroups_2024-Update
Sopen07g025410	No alias	Cellulose synthase	0.06	Orthogroups_2024-Update
Sopen12g029180	No alias	Cellulose synthase	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	transferase activity, transferring glycosyl groups	None	Extended
MF	GO:0016758	transferase activity, transferring hexosyl groups	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	InterProScan predictions
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	InterProScan predictions
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	IEP	Predicted GO
BP	GO:0000097	sulfur amino acid biosynthetic process	IEP	Predicted GO
MF	GO:0003871	5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity	IEP	Predicted GO
MF	GO:0003872	6-phosphofructokinase activity	IEP	Predicted GO
MF	GO:0004506	squalene monooxygenase activity	IEP	Predicted GO
BP	GO:0006082	organic acid metabolic process	IEP	Predicted GO
BP	GO:0006555	methionine metabolic process	IEP	Predicted GO
BP	GO:0006631	fatty acid metabolic process	IEP	Predicted GO
BP	GO:0006633	fatty acid biosynthetic process	IEP	Predicted GO
MF	GO:0008172	S-methyltransferase activity	IEP	Predicted GO
MF	GO:0008443	phosphofructokinase activity	IEP	Predicted GO
BP	GO:0008610	lipid biosynthetic process	IEP	Predicted GO
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	Predicted GO
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	Predicted GO
BP	GO:0009086	methionine biosynthetic process	IEP	Predicted GO
BP	GO:0009690	cytokinin metabolic process	IEP	Predicted GO
BP	GO:0009891	positive regulation of biosynthetic process	IEP	Predicted GO
BP	GO:0009893	positive regulation of metabolic process	IEP	Predicted GO
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	Predicted GO
BP	GO:0010628	positive regulation of gene expression	IEP	Predicted GO
BP	GO:0010817	regulation of hormone levels	IEP	Predicted GO
BP	GO:0016053	organic acid biosynthetic process	IEP	Predicted GO
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Predicted GO
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predicted GO
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	Predicted GO
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Predicted GO
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Predicted GO
MF	GO:0019139	cytokinin dehydrogenase activity	IEP	Predicted GO
MF	GO:0019200	carbohydrate kinase activity	IEP	Predicted GO
BP	GO:0019752	carboxylic acid metabolic process	IEP	Predicted GO
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	Predicted GO
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	Predicted GO
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Predicted GO
BP	GO:0034754	cellular hormone metabolic process	IEP	Predicted GO
MF	GO:0042085	5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity	IEP	Predicted GO
BP	GO:0042445	hormone metabolic process	IEP	Predicted GO
BP	GO:0043436	oxoacid metabolic process	IEP	Predicted GO
BP	GO:0044281	small molecule metabolic process	IEP	Predicted GO
BP	GO:0044283	small molecule biosynthetic process	IEP	Predicted GO
BP	GO:0045893	positive regulation of transcription, DNA-templated	IEP	Predicted GO
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Predicted GO
BP	GO:0048518	positive regulation of biological process	IEP	Predicted GO
BP	GO:0048522	positive regulation of cellular process	IEP	Predicted GO
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Predicted GO
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0051254	positive regulation of RNA metabolic process	IEP	Predicted GO
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	Predicted GO
BP	GO:1902680	positive regulation of RNA biosynthetic process	IEP	Predicted GO
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR005150	Cellulose_synth	93	382

External Links

No external refs found!

Glyma.12G096900

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation