Sopen10g001950

Description : GC-rich sequence DNA-binding factor-like protein

Gene families : OG_42_0003569 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003569_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen10g001950
Cluster	HCCA clusters: Cluster_210

Target	Alias	Description	ECC score	Gene Family Method
GRMZM2G114584	No alias	GC-rich sequence DNA-binding factor-like protein with...	0.02	Orthogroups_2024-Update
Glyma.18G031866	No alias	GC-rich sequence DNA-binding factor-like protein with...	0.02	Orthogroups_2024-Update
PSME_00026293-RA	No alias	(at1g17070 : 821.0) GC-rich sequence DNA-binding...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000467	G_patch_dom	202	243
IPR022783	GCFC_dom	421	687
IPR022159	STIP/TFIP11_N	2	109

External Links

No external refs found!