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  5. Glyma.12G111200

Glyma.12G111200


Description : expansin B3


Gene families : OG_42_0000145 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000145_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.12G111200
Cluster HCCA clusters: Cluster_364

Target Alias Description ECC score Gene Family Method Actions
A4A49_57799 No alias putative expansin-b2 0.04 Orthogroups_2024-Update
GRMZM2G013002 No alias expansin B2 0.04 Orthogroups_2024-Update
GRMZM2G013671 No alias expansin B2 0.04 Orthogroups_2024-Update
GRMZM2G059785 No alias expansin B2 0.03 Orthogroups_2024-Update
GRMZM2G094990 No alias expansin B2 0.04 Orthogroups_2024-Update
GRMZM2G342246 No alias expansin B2 0.04 Orthogroups_2024-Update
PSME_00003968-RA No alias (q7x6j9|exb17_orysa : 259.0) Expansin-B17 precursor... 0.03 Orthogroups_2024-Update
PSME_00009595-RA No alias (q7x6j9|exb17_orysa : 96.7) Expansin-B17 precursor... 0.03 Orthogroups_2024-Update
Potri.019G101900 No alias expansin B3 0.04 Orthogroups_2024-Update
Seita.1G260700.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 170 250
IPR009009 RlpA-like_DPBB 81 157
No external refs found!