1. Home
  2. Species
  3. Glycine max
  4. Sequence
  5. Glyma.12G121400

Glyma.12G121400


Description : RING/U-box superfamily protein


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.12G121400
Cluster HCCA clusters: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
A4A49_11165 No alias ring-h2 finger protein atl8 0.04 Orthogroups_2024-Update
A4A49_21361 No alias ring-h2 finger protein atl78 0.04 Orthogroups_2024-Update
A4A49_36505 No alias e3 ubiquitin-protein ligase atl6 0.03 Orthogroups_2024-Update
At1g49210 No alias E3 ubiquitin-protein ligase ATL76... 0.03 Orthogroups_2024-Update
At3g05200 No alias E3 ubiquitin-protein ligase ATL6... 0.03 Orthogroups_2024-Update
At3g10910 No alias RING-H2 finger protein ATL72... 0.03 Orthogroups_2024-Update
Bradi1g46750 No alias RING/U-box superfamily protein 0.05 Orthogroups_2024-Update
Bradi2g22650 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Brara.A03044.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.C03353.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.E02957.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.G03117.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Brara.H02311.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.I02588.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.J02480.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G004480 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.04G222300 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G062800 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G078800 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G042400 No alias TOXICOS EN LEVADURA 2 0.03 Orthogroups_2024-Update
Glyma.11G242500 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.17G028400 No alias TOXICOS EN LEVADURA 2 0.03 Orthogroups_2024-Update
Glyma.18G014500 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
LOC_Os02g08200 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g35329 No alias RING-H2 finger protein ATL3F, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g46100 No alias RING-H2 finger protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g34650 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_44828g0020 No alias (at3g62690 : 89.0) Encodes a RING-H2 zinc finger protein... 0.03 Orthogroups_2024-Update
MA_5319g0010 No alias (at1g49230 : 120.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_611616g0010 No alias (at1g49230 : 125.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
Pp1s41_270V6 No alias zinc finger (c3hc4-type ring finger) family protein 0.03 Orthogroups_2024-Update
Seita.1G203900.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.2G037300.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.2G087800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G232800.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.004G181300.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.004G181400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.004G187800.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Solyc01g066430 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT2G47560.1) 0.04 Orthogroups_2024-Update
Solyc11g005310 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G49230.1) 0.04 Orthogroups_2024-Update
Sopen03g031440 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen11g001310 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen11g001320 No alias Ring finger domain 0.03 Orthogroups_2024-Update
evm.model.tig00021013.23 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 175 218
No external refs found!