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  5. Glyma.12G126600

Glyma.12G126600


Description : SAUR-like auxin-responsive protein family


Gene families : OG_42_0000038 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000038_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.12G126600
Cluster HCCA clusters: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
Brara.K00328.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.09G219100 No alias SAUR-like auxin-responsive protein family 0.04 Orthogroups_2024-Update
Glyma.09G219200 No alias SAUR-like auxin-responsive protein family 0.04 Orthogroups_2024-Update
Glyma.09G222000 No alias SAUR-like auxin-responsive protein family 0.03 Orthogroups_2024-Update
Glyma.12G034100 No alias SAUR-like auxin-responsive protein family 0.03 Orthogroups_2024-Update
Glyma.12G125000 No alias SAUR-like auxin-responsive protein family 0.04 Orthogroups_2024-Update
LOC_Os02g24700 No alias OsSAUR8 - Auxin-responsive SAUR gene family member, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g09550 No alias expressed protein 0.02 Orthogroups_2024-Update
Potri.009G127000 No alias SAUR-like auxin-responsive protein family 0.03 Orthogroups_2024-Update
Potri.010G253900 No alias delta vacuolar processing enzyme 0.03 Orthogroups_2024-Update
Potri.T144000 No alias SAUR-like auxin-responsive protein family 0.04 Orthogroups_2024-Update
Pp1s107_89V6 No alias saur family protein 0.04 Orthogroups_2024-Update
Solyc10g054760 No alias Small auxin up-regulated RNA80 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009733 response to auxin IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003676 SAUR_fam 19 89
No external refs found!