Glyma.12G139200


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG_42_0000107 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000107_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.12G139200
Cluster HCCA clusters: Cluster_242

Target Alias Description ECC score Gene Family Method Actions
At4g13860 No alias At4g13860 [Source:UniProtKB/TrEMBL;Acc:Q6ID29] 0.03 Orthogroups_2024-Update
Glyma.06G012600 No alias cold, circadian rhythm, and rna binding 2 0.03 Orthogroups_2024-Update
Glyma.11G117600 No alias cold, circadian rhythm, and rna binding 2 0.03 Orthogroups_2024-Update
LOC_Os12g43600 No alias RNA recognition motif containing protein, expressed 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 51 117
No external refs found!