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  5. Glyma.12G150300

Glyma.12G150300


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_42_0000437 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000437_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.12G150300
Cluster HCCA clusters: Cluster_358

Target Alias Description ECC score Gene Family Method Actions
A4A49_25882 No alias compass-like h3k4 histone methylase component wdr5a 0.03 Orthogroups_2024-Update
A4A49_32864 No alias compass-like h3k4 histone methylase component wdr5a 0.03 Orthogroups_2024-Update
Cre06.g276100 No alias Transducin/WD40 repeat-like superfamily protein 0.01 Orthogroups_2024-Update
GRMZM2G048800 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G147400 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.13G279400 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os04g58180 No alias WD-40 repeat family protein, putative, expressed 0.02 Orthogroups_2024-Update
Pp1s46_235V6 No alias MJK13.13; WD-40 repeat family protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.9G568600.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Solyc11g005710 No alias Transducin/WD-like repeat-protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 689 726
IPR001680 WD40_repeat 409 439
IPR001680 WD40_repeat 554 591
IPR001680 WD40_repeat 513 548
No external refs found!