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  5. Glyma.12G150900

Glyma.12G150900


Description : expansin 12


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.12G150900
Cluster HCCA clusters: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
102623 No alias expansin A15 0.04 Orthogroups_2024-Update
179212 No alias expansin A15 0.02 Orthogroups_2024-Update
231226 No alias expansin A9 0.02 Orthogroups_2024-Update
409954 No alias expansin A8 0.02 Orthogroups_2024-Update
419575 No alias expansin A16 0.04 Orthogroups_2024-Update
90332 No alias Barwin-like endoglucanases superfamily protein 0.05 Orthogroups_2024-Update
91129 No alias expansin A15 0.02 Orthogroups_2024-Update
A4A49_04302 No alias expansin-a10 0.03 Orthogroups_2024-Update
A4A49_61517 No alias expansin-a23 0.03 Orthogroups_2024-Update
At1g12560 No alias EXPA7 [Source:UniProtKB/TrEMBL;Acc:A0A178W749] 0.03 Orthogroups_2024-Update
GRMZM2G339122 No alias expansin A1 0.04 Orthogroups_2024-Update
GRMZM2G374248 No alias expansin 11 0.03 Orthogroups_2024-Update
Glyma.02G235900 No alias expansin A8 0.04 Orthogroups_2024-Update
Glyma.07G229000 No alias expansin A15 0.03 Orthogroups_2024-Update
Glyma.19G024200 No alias expansin A15 0.04 Orthogroups_2024-Update
HORVU1Hr1G069830.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
PSME_00014026-RA No alias (at1g69530 : 221.0) Member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
PSME_00052085-RA No alias (at1g69530 : 372.0) Member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
Pp1s11_29V6 No alias expansin 2 0.02 Orthogroups_2024-Update
Pp1s178_63V6 No alias alpha-expansin 1 0.02 Orthogroups_2024-Update
Pp1s246_53V6 No alias alpha-expansin 1 0.02 Orthogroups_2024-Update
Pp1s325_11V6 No alias expa6 gene for putative alpha expansin protein family EXPA6 0.02 Orthogroups_2024-Update
Seita.1G318000.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Seita.5G363100.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Sobic.003G128800.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Sobic.003G444400.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Solyc05g007830 No alias expansin12 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 162 240
IPR009009 RlpA-like_DPBB 67 151
No external refs found!