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  5. Glyma.12G152900

Glyma.12G152900


Description : hAT transposon superfamily


Gene families : OG_42_0000049 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000049_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.12G152900
Cluster HCCA clusters: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
A4A49_43428 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Brara.F01653.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.K01716.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Glyma.03G080400 No alias hAT transposon superfamily 0.05 Orthogroups_2024-Update
Glyma.08G294500 No alias hAT transposon superfamily 0.04 Orthogroups_2024-Update
Glyma.13G192700 No alias hAT transposon superfamily 0.03 Orthogroups_2024-Update
Glyma.14G117400 No alias Function unknown 0.02 Orthogroups_2024-Update
LOC_Os04g47610 No alias hypothetical protein 0.03 Orthogroups_2024-Update
MA_54200g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Solyc02g043850 No alias No description available 0.03 Orthogroups_2024-Update
Solyc03g007510 No alias hAT transposon superfamily (AHRD V3.3 *** AT1G79740.4) 0.03 Orthogroups_2024-Update
Solyc04g039680 No alias No description available 0.04 Orthogroups_2024-Update
Solyc06g036530 No alias No description available 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR007021 DUF659 155 303
IPR008906 HATC_C_dom 528 595
IPR003656 Znf_BED 23 57
No external refs found!