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Sopen10g002430


Description : Ubiquitin family


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen10g002430
Cluster HCCA clusters: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Brara.F02490.1 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
Cre07.g322100 No alias Ubiquitin-like superfamily protein 0.02 Orthogroups_2024-Update
Kfl00013_0180 kfl00013_0180_v1.... (at5g03240 : 138.0) encodes ubiquitin that is attached... 0.02 Orthogroups_2024-Update
Kfl00272_g6 kfl00272_g6_v1.1 (at4g05320 : 751.0) One of five polyubiquitin genes in... 0.02 Orthogroups_2024-Update
Pp1s129_28V6 No alias Putative polyubiquitin 0.02 Orthogroups_2024-Update
Pp1s351_6V6 No alias polyubiquitin containing 7 ubiquitin monomers 0.03 Orthogroups_2024-Update
Seita.2G302900.1 No alias component *(eL40) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Sobic.002G308900.1 No alias component *(eL40) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Sopen10g001540 No alias Ubiquitin family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 155 226
IPR000626 Ubiquitin_dom 3 74
IPR000626 Ubiquitin_dom 231 302
IPR000626 Ubiquitin_dom 79 150
IPR000626 Ubiquitin_dom 383 454
IPR000626 Ubiquitin_dom 307 378
No external refs found!