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  5. Glyma.12G163800

Glyma.12G163800


Description : Major facilitator superfamily protein


Gene families : OG_42_0003747 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003747_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.12G163800
Cluster HCCA clusters: Cluster_385

Target Alias Description ECC score Gene Family Method Actions
MA_985g0020 No alias (at1g59740 : 545.0) Major facilitator superfamily... 0.03 Orthogroups_2024-Update
Solyc01g103030 No alias Major facilitator superfamily protein (AHRD V3.3 *** AT1G59740.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0022857 transmembrane transporter activity IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Predicted GO
MF GO:0004181 metallocarboxypeptidase activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
MF GO:0008235 metalloexopeptidase activity IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR000109 POT_fam 118 541
No external refs found!