Sopen10g002620

Description : EF-hand domain pair

Gene families : OG_42_0000762 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000762_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen10g002620
Cluster	HCCA clusters: Cluster_223

Target	Alias	Description	ECC score	Gene Family Method
A4A49_18148	No alias	calcium-binding protein pbp1	0.02	Orthogroups_2024-Update
At2g46600	No alias	Calcium-binding protein KIC...	0.02	Orthogroups_2024-Update
Glyma.12G142900	No alias	Calcium-binding EF-hand family protein	0.03	Orthogroups_2024-Update
MA_10375806g0010	No alias	(at2g46600 : 129.0) Calcium-binding EF-hand family...	0.02	Orthogroups_2024-Update
Potri.011G129100	No alias	Calcium-binding EF-hand family protein	0.03	Orthogroups_2024-Update
Solyc07g053050	No alias	Calcium-binding family protein (AHRD V3.3 *** B9I910_POPTR)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002048	EF_hand_dom	43	94

External Links

No external refs found!