1. Home
  2. Species
  3. Glycine max
  4. Sequence
  5. Glyma.12G189000

Glyma.12G189000


Description : plant U-box 23


Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.12G189000
Cluster HCCA clusters: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
Bradi5g09720 No alias plant U-box 22 0.03 Orthogroups_2024-Update
GRMZM5G811633 No alias plant U-box 26 0.03 Orthogroups_2024-Update
Glyma.02G196301 No alias plant U-box 24 0.03 Orthogroups_2024-Update
Glyma.14G212200 No alias CYS, MET, PRO, and GLY protein 1 0.05 Orthogroups_2024-Update
HORVU0Hr1G003810.1 No alias E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
HORVU6Hr1G089560.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU7Hr1G040790.2 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
PSME_00049469-RA No alias (at2g35930 : 281.0) Encodes a cytoplasmically localized... 0.03 Orthogroups_2024-Update
PSME_00056652-RA No alias (at2g35930 : 195.0) Encodes a cytoplasmically localized... 0.04 Orthogroups_2024-Update
PSME_00056761-RA No alias (at3g19380 : 247.0) plant U-box 25 (PUB25); FUNCTIONS... 0.02 Orthogroups_2024-Update
Potri.009G016200 No alias plant U-box 23 0.03 Orthogroups_2024-Update
Potri.014G101100 No alias plant U-box 23 0.04 Orthogroups_2024-Update
Potri.015G031000 No alias ARM repeat superfamily protein 0.02 Orthogroups_2024-Update
Potri.016G069500 No alias plant U-box 24 0.02 Orthogroups_2024-Update
Pp1s109_251V6 No alias u-box domain-containing protein 0.04 Orthogroups_2024-Update
Pp1s67_203V6 No alias MLD14.11; U-box domain-containing protein [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Seita.4G109000.1 No alias E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Seita.7G217500.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.9G293600.1 No alias E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Solyc11g068940 No alias U-box domain-containing family protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen11g001970 No alias U-box domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan predictions
BP GO:0016567 protein ubiquitination IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003613 Ubox_domain 6 75
No external refs found!