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  5. Glyma.12G198400

Glyma.12G198400


Description : B-box type zinc finger family protein


Gene families : OG_42_0000803 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000803_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.12G198400
Cluster HCCA clusters: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
A4A49_19758 No alias b-box domain protein 30 0.03 Orthogroups_2024-Update
A4A49_22924 No alias b-box zinc finger protein 32 0.03 Orthogroups_2024-Update
A4A49_62883 No alias b-box domain protein 30 0.03 Orthogroups_2024-Update
At5g54470 No alias BBX29 [Source:UniProtKB/TrEMBL;Acc:A0A178UJV0] 0.03 Orthogroups_2024-Update
Brara.H01521.1 No alias BBX class-V transcription factor 0.02 Orthogroups_2024-Update
Brara.K00095.1 No alias BBX class-V transcription factor 0.03 Orthogroups_2024-Update
Glyma.12G196200 No alias B-box type zinc finger family protein 0.03 Orthogroups_2024-Update
MA_10430891g0010 No alias (at4g27310 : 113.0) B-box type zinc finger family... 0.02 Orthogroups_2024-Update
MA_332069g0010 No alias (at5g54470 : 94.4) B-box type zinc finger family... 0.02 Orthogroups_2024-Update
Potri.017G039400 No alias B-box type zinc finger family protein 0.02 Orthogroups_2024-Update
Pp1s38_346V6 No alias zinc finger (b-box type) family protein 0.02 Orthogroups_2024-Update
Solyc06g063280 No alias LOW QUALITY:Zinc finger family protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc10g006750 No alias ABC-2 and Plant PDR ABC-type transporter family protein... 0.03 Orthogroups_2024-Update
Solyc12g005660 No alias Zinc finger, B-box (AHRD V3.3 *-* A0A103Y7X2_CYNCS) 0.02 Orthogroups_2024-Update
Sopen12g001590 No alias B-box zinc finger 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
BP GO:0042126 nitrate metabolic process IEP Predicted GO
BP GO:0042128 nitrate assimilation IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
BP GO:0071941 nitrogen cycle metabolic process IEP Predicted GO
BP GO:2001057 reactive nitrogen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000315 Znf_B-box 2 42
No external refs found!