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  5. Sopen10g002960

Sopen10g002960


Description : tRNA synthetases class II core domain (F)


Gene families : OG_42_0005773 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005773_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen10g002960
Cluster HCCA clusters: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
At4g39280 No alias Phenylalanine--tRNA ligase alpha subunit, cytoplasmic... 0.04 Orthogroups_2024-Update
Glyma.11G117800 No alias phenylalanyl-tRNA synthetase, putative /... 0.04 Orthogroups_2024-Update
Glyma.12G043200 No alias phenylalanyl-tRNA synthetase, putative /... 0.02 Orthogroups_2024-Update
HORVU5Hr1G061970.11 No alias subunit alpha of phenylalanine-tRNA ligase complex &... 0.03 Orthogroups_2024-Update
LOC_Os10g26130 No alias phenylalanyl-tRNA synthetase, putative, expressed 0.02 Orthogroups_2024-Update
Mp8g03550.1 No alias subunit alpha of phenylalanine-tRNA ligase complex 0.02 Orthogroups_2024-Update
Potri.004G155000 No alias phenylalanyl-tRNA synthetase, putative /... 0.03 Orthogroups_2024-Update
Pp1s358_20V6 No alias phenylalanyl-trnaalpha subunit 0.02 Orthogroups_2024-Update
Sobic.004G307500.1 No alias subunit alpha of phenylalanine-tRNA ligase complex &... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEA InterProScan predictions
MF GO:0004812 aminoacyl-tRNA ligase activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0043039 tRNA aminoacylation IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002319 Phenylalanyl-tRNA_Synthase 208 480
No external refs found!