Glyma.12G212400

Description : Ras-related small GTP-binding family protein

Gene families : OG_42_0000131 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000131_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.12G212400
Cluster	HCCA clusters: Cluster_53

Target	Alias	Description	ECC score	Gene Family Method
GRMZM2G164527	No alias	RAB GTPase homolog A4A	0.03	Orthogroups_2024-Update
Glyma.07G202900	No alias	RAB GTPase homolog A1F	0.04	Orthogroups_2024-Update
HORVU5Hr1G056470.1	No alias	A-class RAB GTPase	0.03	Orthogroups_2024-Update
HORVU5Hr1G114250.1	No alias	A-class RAB GTPase	0.03	Orthogroups_2024-Update
LOC_Os05g01480	No alias	ras-related protein, putative, expressed	0.03	Orthogroups_2024-Update
MA_10430522g0010	No alias	(at1g09630 : 356.0) Encodes a putative GTP-binding...	0.02	Orthogroups_2024-Update
MA_10434967g0010	No alias	(at5g60860 : 392.0) RAB GTPase homolog A1F (RABA1f);...	0.03	Orthogroups_2024-Update
Sobic.001G475500.1	No alias	A-class RAB GTPase	0.03	Orthogroups_2024-Update
Sobic.002G172401.1	No alias	A-class RAB GTPase	0.07	Orthogroups_2024-Update
Solyc01g103380	No alias	Ras-related protein, expressed (AHRD V3.3 *** D8L9F8_WHEAT)	0.03	Orthogroups_2024-Update
Sopen01g039980	No alias	Ras family	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	Predicted GO
MF	GO:0004527	exonuclease activity	IEP	Predicted GO
MF	GO:0008408	3'-5' exonuclease activity	IEP	Predicted GO
MF	GO:0042393	histone binding	IEP	Predicted GO
MF	GO:0043531	ADP binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	15	175

External Links

No external refs found!