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  5. Sopen10g002980

Sopen10g002980


Description : MatE


Gene families : OG_42_0000106 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000106_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen10g002980
Cluster HCCA clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G133006 No alias MATE efflux family protein 0.02 Orthogroups_2024-Update
PSME_00013682-RA No alias (at5g52450 : 512.0) MATE efflux family protein;... 0.02 Orthogroups_2024-Update
Solyc03g112260 No alias Protein DETOXIFICATION (AHRD V3.3 *** K4BK80_SOLLC) 0.04 Orthogroups_2024-Update
Solyc10g007370 No alias Protein DETOXIFICATION (AHRD V3.3 *** K4CXR6_SOLLC) 0.04 Orthogroups_2024-Update
Sopen05g004340 No alias MatE 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006855 drug transmembrane transport IEA InterProScan predictions
MF GO:0015238 drug transmembrane transporter activity IEA InterProScan predictions
MF GO:0015297 antiporter activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002528 MATE_fam 12 142
No external refs found!