Sopen10g002990

Description : MatE

Gene families : OG_42_0000106 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000106_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen10g002990
Cluster	HCCA clusters: Cluster_163

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g66270	No alias	MATE efflux family protein	0.02	Orthogroups_2024-Update
Bradi2g46750	No alias	MATE efflux family protein	0.03	Orthogroups_2024-Update
Bradi5g07152	No alias	MATE efflux family protein	0.03	Orthogroups_2024-Update
Brara.G03028.1	No alias	metabolite transporter *(DTX)	0.03	Orthogroups_2024-Update
Brara.I02477.1	No alias	metabolite transporter *(DTX)	0.03	Orthogroups_2024-Update
Glyma.08G050500	No alias	MATE efflux family protein	0.02	Orthogroups_2024-Update
HORVU7Hr1G047070.5	No alias	metabolite transporter *(DTX)	0.04	Orthogroups_2024-Update
HORVU7Hr1G112340.13	No alias	metabolite transporter *(DTX)	0.02	Orthogroups_2024-Update
Seita.9G071700.1	No alias	metabolite transporter *(DTX)	0.02	Orthogroups_2024-Update
Solyc10g007100	No alias	Protein DETOXIFICATION (AHRD V3.3 *** K4CXP0_SOLLC)	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006855	drug transmembrane transport	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015238	drug transmembrane transporter activity	IEA	InterProScan predictions
MF	GO:0015291	secondary active transmembrane transporter activity	None	Extended
MF	GO:0015297	antiporter activity	IEA	InterProScan predictions
BP	GO:0015893	drug transport	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002528	MATE_fam	189	348
IPR002528	MATE_fam	412	574
IPR001356	Homeobox_dom	21	74

External Links

No external refs found!