Description : histone H2A 10
Gene families : OG_42_0000138 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000138_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Glycine release: Glyma.12G215500 | |
Cluster | HCCA clusters: Cluster_357 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
76653 | No alias | histone H2A 2 | 0.05 | Orthogroups_2024-Update | |
A4A49_29055 | No alias | putative histone h2a.4 | 0.04 | Orthogroups_2024-Update | |
A4A49_61206 | No alias | putative histone h2a.2 | 0.03 | Orthogroups_2024-Update | |
At1g08880 | No alias | Histone H2A [Source:UniProtKB/TrEMBL;Acc:A0A178W8H7] | 0.02 | Orthogroups_2024-Update | |
At5g27670 | No alias | Histone H2A [Source:UniProtKB/TrEMBL;Acc:A0A178UFF2] | 0.02 | Orthogroups_2024-Update | |
At5g59870 | No alias | Probable histone H2A.7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJE8] | 0.04 | Orthogroups_2024-Update | |
Bradi1g25390 | No alias | histone H2A 10 | 0.03 | Orthogroups_2024-Update | |
Brara.A02813.1 | No alias | histone *(H2A) | 0.02 | Orthogroups_2024-Update | |
Brara.B01060.1 | No alias | histone *(H2A) | 0.07 | Orthogroups_2024-Update | |
Brara.C01065.1 | No alias | histone *(H2A) | 0.11 | Orthogroups_2024-Update | |
Brara.E02150.1 | No alias | histone *(H2A) | 0.06 | Orthogroups_2024-Update | |
Brara.F00561.1 | No alias | histone *(H2A) | 0.03 | Orthogroups_2024-Update | |
Brara.F02852.1 | No alias | histone *(H2A) | 0.02 | Orthogroups_2024-Update | |
Brara.J01356.1 | No alias | histone *(H2A) | 0.11 | Orthogroups_2024-Update | |
Cre06.g265350 | No alias | histone H2A 10 | 0.05 | Orthogroups_2024-Update | |
Cre06.g266700 | No alias | histone H2A 10 | 0.02 | Orthogroups_2024-Update | |
Cre06.g268050 | No alias | histone H2A 10 | 0.04 | Orthogroups_2024-Update | |
Cre06.g273900 | No alias | histone H2A 10 | 0.03 | Orthogroups_2024-Update | |
Cre06.g274800 | No alias | histone H2A 10 | 0.03 | Orthogroups_2024-Update | |
Cre06.g275850 | No alias | histone H2A 10 | 0.02 | Orthogroups_2024-Update | |
Cre12.g504750 | No alias | histone H2A 10 | 0.04 | Orthogroups_2024-Update | |
Cre17.g708550 | No alias | histone H2A 10 | 0.01 | Orthogroups_2024-Update | |
Cre17.g711700 | No alias | histone H2A 10 | 0.05 | Orthogroups_2024-Update | |
Cre17.g713400 | No alias | histone H2A 10 | 0.03 | Orthogroups_2024-Update | |
GRMZM2G041381 | No alias | histone H2A 2 | 0.04 | Orthogroups_2024-Update | |
GRMZM2G151726 | No alias | histone H2A 2 | 0.04 | Orthogroups_2024-Update | |
GRMZM2G151826 | No alias | histone H2A 2 | 0.03 | Orthogroups_2024-Update | |
Glyma.13G333900 | No alias | histone H2A 12 | 0.04 | Orthogroups_2024-Update | |
Glyma.15G040400 | No alias | histone H2A 12 | 0.06 | Orthogroups_2024-Update | |
HORVU4Hr1G058810.1 | No alias | histone *(H2A) | 0.03 | Orthogroups_2024-Update | |
HORVU5Hr1G026650.2 | No alias | histone *(H2A) | 0.02 | Orthogroups_2024-Update | |
HORVU6Hr1G021160.1 | No alias | histone *(H2A) | 0.04 | Orthogroups_2024-Update | |
HORVU6Hr1G092390.1 | No alias | histone *(H2A) | 0.03 | Orthogroups_2024-Update | |
HORVU7Hr1G100100.3 | No alias | histone *(H2A) | 0.04 | Orthogroups_2024-Update | |
HORVU7Hr1G100110.4 | No alias | histone *(H2A) | 0.04 | Orthogroups_2024-Update | |
HORVU7Hr1G100120.13 | No alias | histone *(H2A) | 0.04 | Orthogroups_2024-Update | |
HORVU7Hr1G100400.2 | No alias | histone *(H2A) | 0.04 | Orthogroups_2024-Update | |
Kfl00099_g21 | kfl00099_g21_v1.1 | (q2qpg9|h2axb_orysa : 166.0) Probable histone H2AXb -... | 0.03 | Orthogroups_2024-Update | |
Kfl00125_0190 | kfl00125_0190_v1.1 | (p50567|h2a_chlre : 169.0) Histone H2A - Chlamydomonas... | 0.02 | Orthogroups_2024-Update | |
LOC_Os12g34510 | No alias | Core histone H2A/H2B/H3/H4 domain containing protein,... | 0.04 | Orthogroups_2024-Update | |
MA_191819g0010 | No alias | (at4g27230 : 166.0) Encodes HTA2, a histone H2A... | 0.03 | Orthogroups_2024-Update | |
Mp3g00840.1 | No alias | histone (H2A) | 0.02 | Orthogroups_2024-Update | |
PSME_00000143-RA | No alias | (q84nj4|h2a3_orysa : 176.0) Probable histone H2A.3 -... | 0.02 | Orthogroups_2024-Update | |
PSME_00008207-RA | No alias | (p02276|h2a2_wheat : 135.0) Histone H2A.2.1 - Triticum... | 0.03 | Orthogroups_2024-Update | |
PSME_00008214-RA | No alias | (q75l11|h2a6_orysa : 120.0) Probable histone H2A.6 -... | 0.03 | Orthogroups_2024-Update | |
PSME_00015856-RA | No alias | (q84nj4|h2a3_orysa : 144.0) Probable histone H2A.3 -... | 0.03 | Orthogroups_2024-Update | |
Pp1s452_4V6 | No alias | histone 2 | 0.04 | Orthogroups_2024-Update | |
Pp1s55_112V6 | No alias | histone 2 | 0.03 | Orthogroups_2024-Update | |
Seita.2G287100.1 | No alias | histone *(H2A) | 0.05 | Orthogroups_2024-Update | |
Seita.3G063000.1 | No alias | histone *(H2A) | 0.04 | Orthogroups_2024-Update | |
Seita.5G370600.1 | No alias | histone *(H2A) | 0.05 | Orthogroups_2024-Update | |
Seita.9G450000.1 | No alias | histone *(H2A) | 0.04 | Orthogroups_2024-Update | |
Sobic.001G416800.1 | No alias | histone *(H2A) | 0.04 | Orthogroups_2024-Update | |
Solyc01g099410 | No alias | Histone H2A (AHRD V3.3 *** G8IIJ5_SOLLC) | 0.02 | Orthogroups_2024-Update | |
Solyc09g010400 | No alias | Histone H2A (AHRD V3.3 *** K4CR67_SOLLC) | 0.02 | Orthogroups_2024-Update | |
Solyc09g074300 | No alias | Histone H2A (AHRD V3.3 *** K4CV07_SOLLC) | 0.05 | Orthogroups_2024-Update | |
Solyc09g082710 | No alias | Histone H2A (AHRD V3.3 *** K4CVP7_SOLLC) | 0.05 | Orthogroups_2024-Update | |
Solyc10g006560 | No alias | Histone H2A (AHRD V3.3 *** A0A0V0H7M3_SOLCH) | 0.05 | Orthogroups_2024-Update | |
Solyc11g073250 | No alias | Histone H2A (AHRD V3.3 *** K4DB31_SOLLC) | 0.05 | Orthogroups_2024-Update | |
Solyc11g073260 | No alias | Histone H2A (AHRD V3.3 *** K4DB32_SOLLC) | 0.04 | Orthogroups_2024-Update | |
Solyc12g005270 | No alias | Histone H2A (AHRD V3.3 *** K4DB65_SOLLC) | 0.05 | Orthogroups_2024-Update | |
Sopen01g042970 | No alias | Core histone H2A/H2B/H3/H4 | 0.06 | Orthogroups_2024-Update | |
Sopen09g005140 | No alias | Core histone H2A/H2B/H3/H4 | 0.06 | Orthogroups_2024-Update | |
Sopen09g029130 | No alias | Core histone H2A/H2B/H3/H4 | 0.04 | Orthogroups_2024-Update | |
Sopen09g031570 | No alias | Core histone H2A/H2B/H3/H4 | 0.04 | Orthogroups_2024-Update | |
Sopen10g002510 | No alias | Core histone H2A/H2B/H3/H4 | 0.05 | Orthogroups_2024-Update | |
Sopen11g030880 | No alias | Core histone H2A/H2B/H3/H4 | 0.03 | Orthogroups_2024-Update | |
Sopen11g030890 | No alias | Core histone H2A/H2B/H3/H4 | 0.05 | Orthogroups_2024-Update | |
Sopen12g001250 | No alias | Core histone H2A/H2B/H3/H4 | 0.03 | Orthogroups_2024-Update | |
evm.model.contig_533.4 | No alias | (p16866|h2a4_volca : 182.0) Histone H2A-IV - Volvox... | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEA | InterProScan predictions |
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEP | Predicted GO |
MF | GO:0004519 | endonuclease activity | IEP | Predicted GO |
MF | GO:0004521 | endoribonuclease activity | IEP | Predicted GO |
MF | GO:0004525 | ribonuclease III activity | IEP | Predicted GO |
MF | GO:0004540 | ribonuclease activity | IEP | Predicted GO |
MF | GO:0004797 | thymidine kinase activity | IEP | Predicted GO |
MF | GO:0005198 | structural molecule activity | IEP | Predicted GO |
CC | GO:0005622 | intracellular | IEP | Predicted GO |
CC | GO:0005840 | ribosome | IEP | Predicted GO |
BP | GO:0006412 | translation | IEP | Predicted GO |
BP | GO:0006518 | peptide metabolic process | IEP | Predicted GO |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0009058 | biosynthetic process | IEP | Predicted GO |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predicted GO |
CC | GO:0015934 | large ribosomal subunit | IEP | Predicted GO |
MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | Predicted GO |
MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Predicted GO |
MF | GO:0019136 | deoxynucleoside kinase activity | IEP | Predicted GO |
MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Predicted GO |
MF | GO:0019206 | nucleoside kinase activity | IEP | Predicted GO |
BP | GO:0019538 | protein metabolic process | IEP | Predicted GO |
MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Predicted GO |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0043043 | peptide biosynthetic process | IEP | Predicted GO |
BP | GO:0043170 | macromolecule metabolic process | IEP | Predicted GO |
CC | GO:0043226 | organelle | IEP | Predicted GO |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predicted GO |
BP | GO:0043603 | cellular amide metabolic process | IEP | Predicted GO |
BP | GO:0043604 | amide biosynthetic process | IEP | Predicted GO |
BP | GO:0044237 | cellular metabolic process | IEP | Predicted GO |
BP | GO:0044249 | cellular biosynthetic process | IEP | Predicted GO |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0044267 | cellular protein metabolic process | IEP | Predicted GO |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predicted GO |
CC | GO:0044391 | ribosomal subunit | IEP | Predicted GO |
CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predicted GO |
BP | GO:1901576 | organic substance biosynthetic process | IEP | Predicted GO |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
No external refs found! |