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  5. Glyma.12G216700

Glyma.12G216700


Description : Auxin-responsive GH3 family protein


Gene families : OG_42_0000128 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.12G216700
Cluster HCCA clusters: Cluster_558

Target Alias Description ECC score Gene Family Method Actions
427552 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
A4A49_37324 No alias indole-3-acetic acid-amido synthetase gh3.6 0.03 Orthogroups_2024-Update
A4A49_40489 No alias putative indole-3-acetic acid-amido synthetase gh3.9 0.03 Orthogroups_2024-Update
Brara.C00559.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.F00407.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Potri.002G168200 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
Potri.007G050300 No alias Auxin-responsive GH3 family protein 0.04 Orthogroups_2024-Update
Seita.2G375300.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.02 Orthogroups_2024-Update
Seita.8G024800.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.03 Orthogroups_2024-Update
Seita.9G215200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G358800.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.01 Orthogroups_2024-Update
Solyc01g095580 No alias Auxin-responsive GH3 family protein (AHRD V3.3 *** AT2G46370.4) 0.03 Orthogroups_2024-Update
Solyc10g009600 No alias Auxin-responsive GH3 family protein (AHRD V3.3 *** AT2G46370.4) 0.02 Orthogroups_2024-Update
Sopen12g001290 No alias GH3 auxin-responsive promoter 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR004993 GH3 23 357
No external refs found!